CDS

Accession Number TCMCG016C23670
gbkey CDS
Protein Id OMO59157.1
Location join(22687..22953,23050..23156,23667..24126,24282..24350,24799..24920,25208..25423,25674..25779,26119..26231,26497..26641,26861..26980)
Organism Corchorus capsularis
locus_tag CCACVL1_25042

Protein

Length 574aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA215142; BioSample:SAMN03290679;
db_source AWWV01014024.1
Definition hypothetical protein CCACVL1_25042 [Corchorus capsularis]
Locus_tag CCACVL1_25042

EGGNOG-MAPPER Annotation

COG_category GV
Description Phosphoglucan phosphatase LSF1
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE -
KEGG_ko -
EC -
KEGG_Pathway -
GOs GO:0000272        [VIEW IN EMBL-EBI]
GO:0001871        [VIEW IN EMBL-EBI]
GO:0003674        [VIEW IN EMBL-EBI]
GO:0003824        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005783        [VIEW IN EMBL-EBI]
GO:0005789        [VIEW IN EMBL-EBI]
GO:0005791        [VIEW IN EMBL-EBI]
GO:0005975        [VIEW IN EMBL-EBI]
GO:0005976        [VIEW IN EMBL-EBI]
GO:0005977        [VIEW IN EMBL-EBI]
GO:0005982        [VIEW IN EMBL-EBI]
GO:0005983        [VIEW IN EMBL-EBI]
GO:0006073        [VIEW IN EMBL-EBI]
GO:0006091        [VIEW IN EMBL-EBI]
GO:0006112        [VIEW IN EMBL-EBI]
GO:0006793        [VIEW IN EMBL-EBI]
GO:0006796        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009056        [VIEW IN EMBL-EBI]
GO:0009057        [VIEW IN EMBL-EBI]
GO:0009251        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009532        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009569        [VIEW IN EMBL-EBI]
GO:0009570        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0012505        [VIEW IN EMBL-EBI]
GO:0015980        [VIEW IN EMBL-EBI]
GO:0016020        [VIEW IN EMBL-EBI]
GO:0016052        [VIEW IN EMBL-EBI]
GO:0016311        [VIEW IN EMBL-EBI]
GO:0016787        [VIEW IN EMBL-EBI]
GO:0016788        [VIEW IN EMBL-EBI]
GO:0016791        [VIEW IN EMBL-EBI]
GO:0019203        [VIEW IN EMBL-EBI]
GO:0030246        [VIEW IN EMBL-EBI]
GO:0030247        [VIEW IN EMBL-EBI]
GO:0030867        [VIEW IN EMBL-EBI]
GO:0031090        [VIEW IN EMBL-EBI]
GO:0031984        [VIEW IN EMBL-EBI]
GO:0042175        [VIEW IN EMBL-EBI]
GO:0042578        [VIEW IN EMBL-EBI]
GO:0043036        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0044042        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044247        [VIEW IN EMBL-EBI]
GO:0044248        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044262        [VIEW IN EMBL-EBI]
GO:0044264        [VIEW IN EMBL-EBI]
GO:0044275        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044425        [VIEW IN EMBL-EBI]
GO:0044432        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046838        [VIEW IN EMBL-EBI]
GO:0055114        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0098552        [VIEW IN EMBL-EBI]
GO:0098554        [VIEW IN EMBL-EBI]
GO:0098556        [VIEW IN EMBL-EBI]
GO:0098562        [VIEW IN EMBL-EBI]
GO:0098588        [VIEW IN EMBL-EBI]
GO:0098827        [VIEW IN EMBL-EBI]
GO:1901575        [VIEW IN EMBL-EBI]
GO:2001069        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGTCGTTTCCGCTGCAACTCTTCAGTTGCAGAGCAGCTCTCGATCTTCGAAGCAGAGATTCCAGCTTCATCAATGGAGTTTCGTTTAAAACGACGACGTCGAAGAAGAAGCAGCGGCAGCCGCTCACGGTTTTAGCAATGTCGAGTGAAAACTCGTCGATGAAGATGAACTTGAACGAGTATATGGTTTCTCTACAGAAACCTCTCGGCATTCGCTTCGGCTTATCGCTCGATGGCAAAATCTTTGTTCATTCTTTAAAACGCGGAAGTAATGCAGAGAAATCAAGAATAATAATGGTAGGAGACACGTTGAAGAAGGCGAGCGATTCATCTGGTGGAAGACTTATTGAGATCAAGAACTTCGGCGATGCTCAGGAGATGCTGACTGAGAAGACAGGGTCCTTTAGCCTGGTTCTTGAGAGACCCTTCTCTCCTTTTCCAATCCATGAACTGCACACCTCTAGTGATCTTGACATTTTATTTAATCGAGGTCGGGTGCCTGTTGCAACTTGGAACAAAGCTGCATTGGTATCAAATTTACAAACTTCTACCGGGGGTTGTGGAAATTCTGGTTTTGCAATATTTTCCTCAAAGTTTCTAGCATTGCAGGGATTGAAGTTTTTGAATGATCAAAATGGAAATGTTCATTCGAAACTGCAGAAGAATATTCTTGATTCACCCATTAGCCAACTTGTTAGTATTTTTTCTGAGGAAGAGCCTGGAGATGGAGAATGGGCTCATGGAAGCTTCCCACTGGAGGAATATGTTAAGGCACTTAACCGTTCCAAAGGCGAGCTTTACTATAACCACTCTCTTGGCATGCATTATAGTAAGATTACGGAGCAGATATATGTCGGGTCTTGTATACAAACAGATGCTGATGTAGAAACTCTTTCTGATGCGGGAATCACAGCTATATTAAATTTTCAAGGTGGTGTTGAAGCAGAAAATTGGGGAATCAATTCCAAGTCAATCAATGAGGCATGCCAAAGATTGAATATCCTAATGATCAATTATCCTATTAAGGATGGAGACTCCTATGATATAAGGAAGAAATTACCGTTCTCTGTTGGACTCTTATTACGCTTGTTGAAAAAGAACCACCGTGTCTTTGTTACTTGTACTACTGGTTTTGATCGATCTTCAACTTGTGTAATTGCATACCTGCACTGGATGACTGATACTCCACTTCATGCAGCTCATAATTTTGTCACTGGACTGCATAGGTGCAAGCCAGACAGGCCAGCAATAGCTTGGGCAACATGGGATCTTACATCCATGATAGGAGGTGGCAGACATGATGGACCTGCAACACATGTTGTGACCTTTGTTTGGAAAGGCCATGAGGGCGAGGATGTATGCTTAGTTGGAGATTTTACAGGAAATTGGAAAGAACCAATTAAGGCAACCCACAAAAGTGGAGGCAGATATGAAGTTGAAGTTAGACTTCCACAAGGAAAATATTACTACAAGTATATTATTAATGGGAACTGGCGGCATTCAACATCATCGCCTACGGAAAGGGATGAGAGGGGGAACATTAACAATGTGCTTATGTTGGGTGATGCTGCCAGTGTGAGGCCCATAATTCAACCACAAGAGAAGGATGCAAATGTAATAAAGGTGATAGAGAGGTCCTTGACAGAGAACGAGCGATTCATGCTGGCAAAAGCAGCCCGTTGCATTGCATTCTCTGTCTGTCCGATCAGACTAGCCCCCAAGTAG
Protein:  
MSFPLQLFSCRAALDLRSRDSSFINGVSFKTTTSKKKQRQPLTVLAMSSENSSMKMNLNEYMVSLQKPLGIRFGLSLDGKIFVHSLKRGSNAEKSRIIMVGDTLKKASDSSGGRLIEIKNFGDAQEMLTEKTGSFSLVLERPFSPFPIHELHTSSDLDILFNRGRVPVATWNKAALVSNLQTSTGGCGNSGFAIFSSKFLALQGLKFLNDQNGNVHSKLQKNILDSPISQLVSIFSEEEPGDGEWAHGSFPLEEYVKALNRSKGELYYNHSLGMHYSKITEQIYVGSCIQTDADVETLSDAGITAILNFQGGVEAENWGINSKSINEACQRLNILMINYPIKDGDSYDIRKKLPFSVGLLLRLLKKNHRVFVTCTTGFDRSSTCVIAYLHWMTDTPLHAAHNFVTGLHRCKPDRPAIAWATWDLTSMIGGGRHDGPATHVVTFVWKGHEGEDVCLVGDFTGNWKEPIKATHKSGGRYEVEVRLPQGKYYYKYIINGNWRHSTSSPTERDERGNINNVLMLGDAASVRPIIQPQEKDANVIKVIERSLTENERFMLAKAARCIAFSVCPIRLAPK